Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm14130-201ENSMUST00000118417 987 ntBASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm11331-201ENSMUST00000119764 288 ntBASIC11.15□□□□□ -0.62
Scrt1Q99M85 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm25732-201ENSMUST00000175168 60 ntBASIC11.15□□□□□ -0.62
Scrt1Q99M85 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm28450-201ENSMUST00000187349 638 ntBASIC11.15□□□□□ -0.62
Scrt1Q99M85 AA914427-201ENSMUST00000193194 1166 ntBASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm8099-201ENSMUST00000200510 742 ntBASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm44262-201ENSMUST00000204969 372 ntBASIC11.15□□□□□ -0.62
Scrt1Q99M85 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.15□□□□□ -0.62
Scrt1Q99M85 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.15□□□□□ -0.62
Scrt1Q99M85 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.15□□□□□ -0.62
Scrt1Q99M85 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Scrt1Q99M85 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Scrt1Q99M85 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Scrt1Q99M85 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Scrt1Q99M85 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Scrt1Q99M85 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Scrt1Q99M85 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.14□□□□□ -0.63
Scrt1Q99M85 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.14□□□□□ -0.63
Scrt1Q99M85 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Gm25214-201ENSMUST00000104573 129 ntBASIC11.14□□□□□ -0.63
Scrt1Q99M85 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.14□□□□□ -0.63
Scrt1Q99M85 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.14□□□□□ -0.63
Scrt1Q99M85 Gm28693-202ENSMUST00000190758 331 ntBASIC11.14□□□□□ -0.63
Scrt1Q99M85 Gm13097-201ENSMUST00000210722 397 ntBASIC11.14□□□□□ -0.63
Scrt1Q99M85 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.14□□□□□ -0.63
Scrt1Q99M85 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scrt1Q99M85 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.13□□□□□ -0.63
Scrt1Q99M85 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.13□□□□□ -0.63
Scrt1Q99M85 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms