Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Gm8810-201ENSMUST00000172895 754 ntBASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Gm5035-201ENSMUST00000215581 927 ntBASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Gm8213-201ENSMUST00000118191 441 ntBASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Proscos-202ENSMUST00000178990 666 ntBASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Gm37922-201ENSMUST00000195596 455 ntBASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Gm8598-201ENSMUST00000221184 836 ntBASIC12□□□□□ -0.49
Chmp1b1Q99LU0 AC110817.1-201ENSMUST00000225706 605 ntBASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Gm13050-201ENSMUST00000122149 1345 ntBASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp1b1Q99LU0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Gm13369-201ENSMUST00000119442 987 ntBASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Gm11814-201ENSMUST00000119515 929 ntBASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Gm11803-201ENSMUST00000119966 444 ntBASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Gm17150-201ENSMUST00000165577 381 ntBASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms