Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Proscos-202ENSMUST00000178990 666 ntBASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Paupar-201ENSMUST00000194826 3482 ntBASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdk5rap3Q99LM2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Gm8213-201ENSMUST00000118191 441 ntBASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Gm10156-201ENSMUST00000122364 462 ntBASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Gm5866-201ENSMUST00000177881 973 ntBASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Gm18018-201ENSMUST00000198273 408 ntBASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cdk5rap3Q99LM2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms