Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Gm12203-201ENSMUST00000118235 598 ntBASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Gm12209-201ENSMUST00000120089 596 ntBASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Gm9002-201ENSMUST00000178437 499 ntBASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Gm10012-201ENSMUST00000078252 192 ntBASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Cstf3Q99LI7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Gm11814-201ENSMUST00000119515 929 ntBASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Gm22121-201ENSMUST00000175148 54 ntBASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Gm27892-201ENSMUST00000185017 106 ntBASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Gm37042-201ENSMUST00000193816 581 ntBASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cstf3Q99LI7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Gm15806-201ENSMUST00000120696 955 ntBASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Gm26185-201ENSMUST00000157692 266 ntBASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Gm23363-201ENSMUST00000175024 79 ntBASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cstf3Q99LI7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms