Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm24644-201ENSMUST00000157114 139 ntBASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm8810-201ENSMUST00000172895 754 ntBASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm18062-201ENSMUST00000208020 547 ntBASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm18055-201ENSMUST00000208254 547 ntBASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm7561-201ENSMUST00000211203 886 ntBASIC12.28□□□□□ -0.44
Vmp1Q99KU0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm25857-201ENSMUST00000082788 129 ntBASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vmp1Q99KU0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vmp1Q99KU0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vmp1Q99KU0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vmp1Q99KU0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vmp1Q99KU0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vmp1Q99KU0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vmp1Q99KU0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vmp1Q99KU0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Vmp1Q99KU0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vmp1Q99KU0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.27□□□□□ -0.45
Vmp1Q99KU0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Gm6447-201ENSMUST00000118905 835 ntBASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Gm22331-201ENSMUST00000158066 136 ntBASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.26□□□□□ -0.45
Vmp1Q99KU0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms