Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfc4Q99J62 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.6□□□□□ -0.07
Rfc4Q99J62 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.6□□□□□ -0.07
Rfc4Q99J62 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfc4Q99J62 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rfc4Q99J62 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.59□□□□□ -0.07
Rfc4Q99J62 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.59□□□□□ -0.07
Rfc4Q99J62 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.59□□□□□ -0.07
Rfc4Q99J62 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.59□□□□□ -0.07
Rfc4Q99J62 Gm45598-202ENSMUST00000210719 986 ntBASIC14.59□□□□□ -0.07
Rfc4Q99J62 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.59□□□□□ -0.07
Rfc4Q99J62 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.59□□□□□ -0.07
Rfc4Q99J62 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfc4Q99J62 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rfc4Q99J62 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Rfc4Q99J62 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rfc4Q99J62 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Rfc4Q99J62 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Mir7032-201ENSMUST00000185154 79 ntBASIC14.58□□□□□ -0.08
Rfc4Q99J62 Gm37835-201ENSMUST00000193305 361 ntBASIC14.58□□□□□ -0.08
Rfc4Q99J62 Spcs1-203ENSMUST00000226374 592 ntBASIC14.58□□□□□ -0.08
Rfc4Q99J62 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.58□□□□□ -0.08
Rfc4Q99J62 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.58□□□□□ -0.08
Rfc4Q99J62 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.58□□□□□ -0.08
Rfc4Q99J62 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.58□□□□□ -0.08
Rfc4Q99J62 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rfc4Q99J62 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc4Q99J62 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rfc4Q99J62 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc4Q99J62 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc4Q99J62 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc4Q99J62 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc4Q99J62 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.57□□□□□ -0.08
Rfc4Q99J62 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rfc4Q99J62 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm9062-201ENSMUST00000117712 727 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm29615-201ENSMUST00000185371 697 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm28224-201ENSMUST00000186078 697 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm29001-201ENSMUST00000186177 697 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm28292-201ENSMUST00000186593 697 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm28101-201ENSMUST00000187608 697 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm29076-201ENSMUST00000187689 697 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm28302-201ENSMUST00000187931 697 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm28646-201ENSMUST00000188220 697 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm28205-201ENSMUST00000189177 697 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm29032-201ENSMUST00000189797 697 ntBASIC14.57□□□□□ -0.08
Rfc4Q99J62 Gm28695-201ENSMUST00000190300 697 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms