Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha3Q91Y16 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Gm19184-201ENSMUST00000196798 928 ntBASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Gm43630-201ENSMUST00000201550 776 ntBASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdha3Q91Y16 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Gm13392-201ENSMUST00000117708 150 ntBASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Gm12363-201ENSMUST00000122250 668 ntBASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Gm22121-201ENSMUST00000175148 54 ntBASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Gm37008-201ENSMUST00000195712 319 ntBASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms