Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Gm9794-201ENSMUST00000202370 423 ntBASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Gm14005-208ENSMUST00000223654 681 ntBASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb3Q91XZ7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.83□□□□□ -0.35
Pcdhb3Q91XZ7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdhb3Q91XZ7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Pcdhb3Q91XZ7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdhb3Q91XZ7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.83□□□□□ -0.35
Pcdhb3Q91XZ7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdhb3Q91XZ7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdhb3Q91XZ7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.83□□□□□ -0.35
Pcdhb3Q91XZ7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdhb3Q91XZ7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Gm25109-201ENSMUST00000122474 114 ntBASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Gm10766-202ENSMUST00000194123 606 ntBASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Gm37709-201ENSMUST00000195074 600 ntBASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Gm44607-201ENSMUST00000205611 1090 ntBASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms