Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Gm37986-201ENSMUST00000193285 383 ntBASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Gm17812-201ENSMUST00000204935 318 ntBASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Gm45598-202ENSMUST00000210719 986 ntBASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb5Q91XZ5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Gm14644-201ENSMUST00000116671 647 ntBASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Gm42997-202ENSMUST00000200321 985 ntBASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb5Q91XZ5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Gm12176-201ENSMUST00000121420 875 ntBASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Gm42937-201ENSMUST00000197360 752 ntBASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Gm19187-201ENSMUST00000206781 892 ntBASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb5Q91XZ5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb5Q91XZ5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb5Q91XZ5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb5Q91XZ5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms