Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Gm5187-201ENSMUST00000117317 991 ntBASIC12.58□□□□□ -0.4
Usb1Q91W78 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.58□□□□□ -0.4
Usb1Q91W78 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.58□□□□□ -0.4
Usb1Q91W78 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.58□□□□□ -0.4
Usb1Q91W78 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.58□□□□□ -0.4
Usb1Q91W78 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.58□□□□□ -0.4
Usb1Q91W78 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Usb1Q91W78 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usb1Q91W78 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.58□□□□□ -0.4
Usb1Q91W78 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usb1Q91W78 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Gm8805-201ENSMUST00000117848 313 ntBASIC12.57□□□□□ -0.4
Usb1Q91W78 Gm11637-201ENSMUST00000120601 592 ntBASIC12.57□□□□□ -0.4
Usb1Q91W78 Gm13123-201ENSMUST00000122173 492 ntBASIC12.57□□□□□ -0.4
Usb1Q91W78 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.57□□□□□ -0.4
Usb1Q91W78 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.57□□□□□ -0.4
Usb1Q91W78 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Gm28693-202ENSMUST00000190758 331 ntBASIC12.57□□□□□ -0.4
Usb1Q91W78 Gm42693-201ENSMUST00000196779 631 ntBASIC12.57□□□□□ -0.4
Usb1Q91W78 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Usb1Q91W78 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.57□□□□□ -0.4
Usb1Q91W78 Gm10146-201ENSMUST00000072739 309 ntBASIC12.57□□□□□ -0.4
Usb1Q91W78 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.57□□□□□ -0.4
Usb1Q91W78 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Usb1Q91W78 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usb1Q91W78 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.56□□□□□ -0.4
Usb1Q91W78 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.56□□□□□ -0.4
Usb1Q91W78 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usb1Q91W78 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usb1Q91W78 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usb1Q91W78 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usb1Q91W78 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usb1Q91W78 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.56□□□□□ -0.4
Usb1Q91W78 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usb1Q91W78 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usb1Q91W78 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usb1Q91W78 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usb1Q91W78 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Usb1Q91W78 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms