Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim60Q8VI40 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.1□□□□□ -0.31
Trim60Q8VI40 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.1□□□□□ -0.31
Trim60Q8VI40 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.09□□□□□ -0.31
Trim60Q8VI40 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gm13123-201ENSMUST00000122173 492 ntBASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gm2231-201ENSMUST00000125661 612 ntBASIC13.09□□□□□ -0.31
Trim60Q8VI40 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gm28911-201ENSMUST00000188837 117 ntBASIC13.09□□□□□ -0.31
Trim60Q8VI40 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.09□□□□□ -0.31
Trim60Q8VI40 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim60Q8VI40 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.08□□□□□ -0.31
Trim60Q8VI40 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim60Q8VI40 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.31
Trim60Q8VI40 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim60Q8VI40 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.31
Trim60Q8VI40 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim60Q8VI40 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.08□□□□□ -0.32
Trim60Q8VI40 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.08□□□□□ -0.32
Trim60Q8VI40 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Gm10156-201ENSMUST00000122364 462 ntBASIC13.08□□□□□ -0.32
Trim60Q8VI40 Gm26185-201ENSMUST00000157692 266 ntBASIC13.08□□□□□ -0.32
Trim60Q8VI40 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Gm22121-201ENSMUST00000175148 54 ntBASIC13.08□□□□□ -0.32
Trim60Q8VI40 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.08□□□□□ -0.32
Trim60Q8VI40 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms