Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Pcdh18Q8VHR0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.27□□□□□ -0.44
Pcdh18Q8VHR0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Pcdh18Q8VHR0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh18Q8VHR0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Pcdh18Q8VHR0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh18Q8VHR0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh18Q8VHR0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Gm19078-201ENSMUST00000206311 727 ntBASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Syt7-204ENSMUST00000223586 1344 ntBASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh18Q8VHR0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Btrc-209ENSMUST00000224478 2194 ntBASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdh18Q8VHR0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh18Q8VHR0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms