Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Gm15483-201ENSMUST00000120338 456 ntBASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Rprl2-201ENSMUST00000157150 290 ntBASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Gm2756-201ENSMUST00000195851 400 ntBASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc9Q8VC31 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 AC154314.2-201ENSMUST00000223677 3502 ntBASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc9Q8VC31 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc9Q8VC31 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms