Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Gm26927-201ENSMUST00000182385 965 ntBASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Gm29127-201ENSMUST00000188304 517 ntBASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Gm12390-201ENSMUST00000117897 397 ntBASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Gm12363-201ENSMUST00000122250 668 ntBASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Gm17150-201ENSMUST00000165577 381 ntBASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim29Q8R2Q0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Gm1335-201ENSMUST00000121653 386 ntBASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Gm7029-201ENSMUST00000173226 450 ntBASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim29Q8R2Q0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Gm16177-201ENSMUST00000120728 718 ntBASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Gm40466-201ENSMUST00000212174 422 ntBASIC14.47□□□□□ -0.09
Trim29Q8R2Q0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms