Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Gm43947-201ENSMUST00000203019 959 ntBASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp7Q8R1T1 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Gm14644-201ENSMUST00000116671 647 ntBASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Gm27552-201ENSMUST00000183351 62 ntBASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Gm27844-201ENSMUST00000183613 62 ntBASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp7Q8R1T1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm12266-201ENSMUST00000120311 962 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm17040-202ENSMUST00000170597 889 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm29615-201ENSMUST00000185371 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm28224-201ENSMUST00000186078 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm29001-201ENSMUST00000186177 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm28292-201ENSMUST00000186593 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm28101-201ENSMUST00000187608 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm29076-201ENSMUST00000187689 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm28302-201ENSMUST00000187931 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm28646-201ENSMUST00000188220 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm9230-201ENSMUST00000188228 532 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm28205-201ENSMUST00000189177 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm29032-201ENSMUST00000189797 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm28695-201ENSMUST00000190300 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm37448-201ENSMUST00000192795 697 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm37666-201ENSMUST00000194110 866 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Gm42937-201ENSMUST00000197360 752 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 170.7 ms