Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm25881-201ENSMUST00000157783 103 ntBASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm8194-201ENSMUST00000159783 859 ntBASIC14.29□□□□□ -0.12
Syne4Q8CII8 Mir7677-201ENSMUST00000184226 67 ntBASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm17827-201ENSMUST00000211825 742 ntBASIC14.29□□□□□ -0.12
Syne4Q8CII8 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.29□□□□□ -0.12
Syne4Q8CII8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syne4Q8CII8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.28□□□□□ -0.12
Syne4Q8CII8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gm15703-201ENSMUST00000120250 880 ntBASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gm17391-201ENSMUST00000171036 126 ntBASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gm18304-201ENSMUST00000189162 546 ntBASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gm43916-201ENSMUST00000205062 967 ntBASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Syne4Q8CII8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne4Q8CII8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.27□□□□□ -0.12
Syne4Q8CII8 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.27□□□□□ -0.12
Syne4Q8CII8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Syne4Q8CII8 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Gm43962-201ENSMUST00000203898 190 ntBASIC14.27□□□□□ -0.13
Syne4Q8CII8 Gm10752-201ENSMUST00000218348 729 ntBASIC14.27□□□□□ -0.13
Syne4Q8CII8 Gm270-201ENSMUST00000223010 976 ntBASIC14.27□□□□□ -0.13
Syne4Q8CII8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms