Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc87Q8CDL9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Mir1894-201ENSMUST00000122802 81 ntBASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Gm8463-201ENSMUST00000208573 613 ntBASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Gm5035-201ENSMUST00000215581 927 ntBASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc87Q8CDL9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc87Q8CDL9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc87Q8CDL9 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.46□□□□□ -0.26
Ccdc87Q8CDL9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc87Q8CDL9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc87Q8CDL9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc87Q8CDL9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc87Q8CDL9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Ccdc87Q8CDL9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Ccdc87Q8CDL9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Gm9630-201ENSMUST00000178304 885 ntBASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Gm43433-201ENSMUST00000196573 481 ntBASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc87Q8CDL9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms