Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.97□□□□□ -0.17
Trim9Q8C7M3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Daam2-202ENSMUST00000224595 1926 ntBASIC13.97□□□□□ -0.17
Trim9Q8C7M3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.96□□□□□ -0.17
Trim9Q8C7M3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Gm15824-201ENSMUST00000119516 955 ntBASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Gm12502-201ENSMUST00000120197 444 ntBASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Gm8738-201ENSMUST00000172606 329 ntBASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim9Q8C7M3 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.96□□□□□ -0.18
Trim9Q8C7M3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim9Q8C7M3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Gm11425-201ENSMUST00000119608 498 ntBASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Gm9396-201ENSMUST00000076703 567 ntBASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim9Q8C7M3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim9Q8C7M3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms