Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm6991-201ENSMUST00000218475 1178 ntBASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm12058-201ENSMUST00000118614 437 ntBASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.06□□□□□ -0.16
Trim47Q8C0E3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm8018-201ENSMUST00000173536 789 ntBASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm21769-201ENSMUST00000211922 111 ntBASIC14.06□□□□□ -0.16
Trim47Q8C0E3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim47Q8C0E3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.05□□□□□ -0.16
Trim47Q8C0E3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Gm25214-201ENSMUST00000104573 129 ntBASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Gm30285-201ENSMUST00000214614 422 ntBASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.05□□□□□ -0.16
Trim47Q8C0E3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim47Q8C0E3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Gm15703-201ENSMUST00000120250 880 ntBASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Gm11597-201ENSMUST00000121423 964 ntBASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim47Q8C0E3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms