Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trub1Q8C0D0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Gm14660-201ENSMUST00000119809 575 ntBASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Gm11964-201ENSMUST00000120982 444 ntBASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Gm25927-201ENSMUST00000175058 117 ntBASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Gm44124-201ENSMUST00000204159 472 ntBASIC13.06□□□□□ -0.32
Trub1Q8C0D0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.06□□□□□ -0.32
Trub1Q8C0D0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm13226-201ENSMUST00000117838 404 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm13492-201ENSMUST00000119772 665 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm25261-201ENSMUST00000157416 134 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm9630-201ENSMUST00000178304 885 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm18584-201ENSMUST00000203098 964 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Snora73a-201ENSMUST00000082453 205 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trub1Q8C0D0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Rubie-203ENSMUST00000227803 2430 ntBASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trub1Q8C0D0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms