Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm5566-201ENSMUST00000116118 459 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Anp32-ps-201ENSMUST00000118265 388 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm14660-201ENSMUST00000119809 575 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm11407-201ENSMUST00000120362 1058 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm14999-201ENSMUST00000121039 624 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim35Q8C006 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm27306-201ENSMUST00000183970 107 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim35Q8C006 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm18861-201ENSMUST00000202509 1186 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 AC164612.2-201ENSMUST00000215737 719 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm3473-201ENSMUST00000216911 1096 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 AC174082.2-201ENSMUST00000222094 543 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim35Q8C006 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.06□□□□□ -0.16
Trim35Q8C006 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim35Q8C006 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trim35Q8C006 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim35Q8C006 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm13223-201ENSMUST00000118609 747 ntBASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm12202-201ENSMUST00000121196 811 ntBASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm13999-201ENSMUST00000141511 969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm26468-201ENSMUST00000158644 106 ntBASIC14.05□□□□□ -0.16
Trim35Q8C006 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim35Q8C006 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim35Q8C006 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm27755-201ENSMUST00000184623 132 ntBASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm37230-201ENSMUST00000194491 818 ntBASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm38019-201ENSMUST00000195133 380 ntBASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm2622-201ENSMUST00000200018 471 ntBASIC14.05□□□□□ -0.16
Trim35Q8C006 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms