Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.2□□□□□ -0.62
SprnQ8BWU1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Gm8602-201ENSMUST00000184045 607 ntBASIC11.2□□□□□ -0.62
SprnQ8BWU1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.2□□□□□ -0.62
SprnQ8BWU1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Gm42550-201ENSMUST00000201553 960 ntBASIC11.2□□□□□ -0.62
SprnQ8BWU1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.2□□□□□ -0.62
SprnQ8BWU1 Gm19220-201ENSMUST00000222682 803 ntBASIC11.2□□□□□ -0.62
SprnQ8BWU1 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.2□□□□□ -0.62
SprnQ8BWU1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
SprnQ8BWU1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.19□□□□□ -0.62
SprnQ8BWU1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.19□□□□□ -0.62
SprnQ8BWU1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Gm14350-201ENSMUST00000116642 640 ntBASIC11.19□□□□□ -0.62
SprnQ8BWU1 Gm12341-201ENSMUST00000119724 503 ntBASIC11.19□□□□□ -0.62
SprnQ8BWU1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Gm43433-201ENSMUST00000196573 481 ntBASIC11.19□□□□□ -0.62
SprnQ8BWU1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.19□□□□□ -0.62
SprnQ8BWU1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SprnQ8BWU1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.18□□□□□ -0.62
SprnQ8BWU1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SprnQ8BWU1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SprnQ8BWU1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms