Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Gm9083-201ENSMUST00000120423 819 ntBASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp40Q8BWR4 Gm13142-201ENSMUST00000117213 1453 ntBASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Gm45342-201ENSMUST00000210903 1363 ntBASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Gm23119-201ENSMUST00000158610 140 ntBASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Gm9996-201ENSMUST00000070359 913 ntBASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Gm43721-201ENSMUST00000199677 2313 ntBASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp40Q8BWR4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC17.3■□□□□ 0.36
Usp40Q8BWR4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 AC159205.5-202ENSMUST00000224849 386 ntBASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Gm5884-201ENSMUST00000036712 1479 ntBASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp40Q8BWR4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp40Q8BWR4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp40Q8BWR4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms