Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Gm18059-201ENSMUST00000208073 580 ntBASIC10.62□□□□□ -0.71
Trank1Q8BV79 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trank1Q8BV79 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trank1Q8BV79 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.61□□□□□ -0.71
Trank1Q8BV79 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.61□□□□□ -0.71
Trank1Q8BV79 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.61□□□□□ -0.71
Trank1Q8BV79 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Mir181d-201ENSMUST00000102383 72 ntBASIC10.61□□□□□ -0.71
Trank1Q8BV79 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Gm12030-201ENSMUST00000121917 223 ntBASIC10.61□□□□□ -0.71
Trank1Q8BV79 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.61□□□□□ -0.71
Trank1Q8BV79 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.61□□□□□ -0.71
Trank1Q8BV79 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Gm45575-201ENSMUST00000210283 548 ntBASIC10.61□□□□□ -0.71
Trank1Q8BV79 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.61□□□□□ -0.71
Trank1Q8BV79 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.61□□□□□ -0.71
Trank1Q8BV79 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trank1Q8BV79 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm9507-202ENSMUST00000180157 654 ntBASIC10.6□□□□□ -0.71
Trank1Q8BV79 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm45527-201ENSMUST00000211052 774 ntBASIC10.6□□□□□ -0.71
Trank1Q8BV79 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.6□□□□□ -0.71
Trank1Q8BV79 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm13549-201ENSMUST00000118339 796 ntBASIC10.6□□□□□ -0.71
Trank1Q8BV79 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm6855-201ENSMUST00000206307 790 ntBASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm18204-201ENSMUST00000209835 793 ntBASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trank1Q8BV79 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.6□□□□□ -0.71
Trank1Q8BV79 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms