Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Gm12928-201ENSMUST00000117115 573 ntBASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Gm11618-201ENSMUST00000117946 267 ntBASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Gm14921-201ENSMUST00000118643 908 ntBASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Gm14704-201ENSMUST00000120300 874 ntBASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cdhr3Q8BL00 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm12859-201ENSMUST00000117834 427 ntBASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm8805-201ENSMUST00000117848 313 ntBASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm13123-201ENSMUST00000122173 492 ntBASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms