Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Gm22018-201ENSMUST00000104357 131 ntBASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Gm11591-201ENSMUST00000120063 702 ntBASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Gm6222-202ENSMUST00000182143 629 ntBASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Gm37008-201ENSMUST00000195712 319 ntBASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Gm19184-201ENSMUST00000196798 928 ntBASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Gm9899-201ENSMUST00000065519 555 ntBASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Gm10478-201ENSMUST00000084451 396 ntBASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm15897-201ENSMUST00000117770 1486 ntBASIC11□□□□□ -0.65
Srrm4Q8BKA3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm16379-201ENSMUST00000161469 348 ntBASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm8762-201ENSMUST00000193486 339 ntBASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm43438-201ENSMUST00000198133 379 ntBASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm43416-201ENSMUST00000201916 1015 ntBASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm44772-201ENSMUST00000207623 1191 ntBASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm32025-201ENSMUST00000217960 307 ntBASIC11□□□□□ -0.65
Srrm4Q8BKA3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm8793-201ENSMUST00000183069 1303 ntBASIC11□□□□□ -0.65
Srrm4Q8BKA3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Srrm4Q8BKA3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Srrm4Q8BKA3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Srrm4Q8BKA3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Srrm4Q8BKA3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms