Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Gm27331-201ENSMUST00000183705 60 ntBASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.88□□□□□ -0.03
Samm50Q8BGH2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Gm13369-201ENSMUST00000119442 987 ntBASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Samm50Q8BGH2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 AY702102-202ENSMUST00000194651 1173 ntBASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Gm37922-201ENSMUST00000195596 455 ntBASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Gm44069-201ENSMUST00000204898 506 ntBASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Samm50Q8BGH2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Samm50Q8BGH2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms