Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm27514-201ENSMUST00000183692 110 ntBASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Gm5186-201ENSMUST00000218781 920 ntBASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Gm24526-201ENSMUST00000082921 158 ntBASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4bQ8BGE6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Gm3890-201ENSMUST00000182416 207 ntBASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4bQ8BGE6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Gm14127-201ENSMUST00000117906 678 ntBASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.93□□□□□ -0.5
Atg4bQ8BGE6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms