Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim65Q8BFW4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim65Q8BFW4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim65Q8BFW4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim65Q8BFW4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim65Q8BFW4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Gm25927-201ENSMUST00000175058 117 ntBASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim65Q8BFW4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Gm11591-201ENSMUST00000120063 702 ntBASIC13.57□□□□□ -0.24
Trim65Q8BFW4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Gm6222-202ENSMUST00000182143 629 ntBASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.57□□□□□ -0.24
Trim65Q8BFW4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Gm24526-201ENSMUST00000082921 158 ntBASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Gm26035-201ENSMUST00000083065 308 ntBASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim65Q8BFW4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.56□□□□□ -0.24
Trim65Q8BFW4 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim65Q8BFW4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms