Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Gm23675-201ENSMUST00000157311 125 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gm12712-201ENSMUST00000120676 801 ntBASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gm8815-201ENSMUST00000173809 620 ntBASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gm26134-201ENSMUST00000178484 110 ntBASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gm5451-201ENSMUST00000080545 579 ntBASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr5Q80TP3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Gm23255-201ENSMUST00000102244 110 ntBASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Gm14942-201ENSMUST00000119642 336 ntBASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Gm8451-201ENSMUST00000170338 447 ntBASIC10.66□□□□□ -0.7
Ubr5Q80TP3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.66□□□□□ -0.7
Ubr5Q80TP3 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Gm7536-201ENSMUST00000077389 444 ntBASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Gm5453-201ENSMUST00000080866 447 ntBASIC10.66□□□□□ -0.7
Ubr5Q80TP3 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr5Q80TP3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms