Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Gm3890-201ENSMUST00000182416 207 ntBASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Gm30285-201ENSMUST00000214614 422 ntBASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Gm17330-201ENSMUST00000221047 165 ntBASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.33□□□□□ -0.27
Prpf38bQ80SY5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf38bQ80SY5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf38bQ80SY5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.33□□□□□ -0.27
Prpf38bQ80SY5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf38bQ80SY5 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.33□□□□□ -0.27
Prpf38bQ80SY5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf38bQ80SY5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.27
Prpf38bQ80SY5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Prpf38bQ80SY5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Gm8194-201ENSMUST00000159783 859 ntBASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Gm37042-201ENSMUST00000193816 581 ntBASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Gm26315-201ENSMUST00000083890 321 ntBASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf38bQ80SY5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Gm26956-201ENSMUST00000182176 986 ntBASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms