Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm13097-201ENSMUST00000210722 397 ntBASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubfd1Q78JW9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Gm3096-201ENSMUST00000185770 364 ntBASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ubfd1Q78JW9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm24830-201ENSMUST00000102024 166 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm15276-201ENSMUST00000145953 498 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm25890-201ENSMUST00000177643 165 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm22614-201ENSMUST00000178300 165 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm22042-201ENSMUST00000082989 165 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm26232-201ENSMUST00000083360 166 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm24136-201ENSMUST00000083374 165 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Gm26110-201ENSMUST00000083971 165 ntBASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubfd1Q78JW9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms