Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Gm15703-201ENSMUST00000120250 880 ntBASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Gm16296-201ENSMUST00000159905 325 ntBASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Gm18584-201ENSMUST00000203098 964 ntBASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.81□□□□□ -0.52
Timd4Q6U7R4 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.81□□□□□ -0.52
Timd4Q6U7R4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Gm24526-201ENSMUST00000082921 158 ntBASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Timd4Q6U7R4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Gm12502-201ENSMUST00000120197 444 ntBASIC11.8□□□□□ -0.52
Timd4Q6U7R4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Gm8738-201ENSMUST00000172606 329 ntBASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Gm9630-201ENSMUST00000178304 885 ntBASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Gm38158-201ENSMUST00000194617 339 ntBASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Gm43133-201ENSMUST00000197472 463 ntBASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Timd4Q6U7R4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Timd4Q6U7R4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timd4Q6U7R4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timd4Q6U7R4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timd4Q6U7R4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timd4Q6U7R4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Timd4Q6U7R4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timd4Q6U7R4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timd4Q6U7R4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timd4Q6U7R4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms