Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Gm11803-201ENSMUST00000119966 444 ntBASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm24231-201ENSMUST00000104315 133 ntBASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm26185-201ENSMUST00000157692 266 ntBASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm42599-201ENSMUST00000201308 469 ntBASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm35960-201ENSMUST00000202712 767 ntBASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rad54bQ6PFE3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms