Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.68□□□□□ -0.06
Nup98Q6PFD9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup98Q6PFD9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Gm19459-201ENSMUST00000176240 835 ntBASIC14.67□□□□□ -0.06
Nup98Q6PFD9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup98Q6PFD9 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm14058-201ENSMUST00000116082 735 ntBASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm15595-201ENSMUST00000120840 961 ntBASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm18711-201ENSMUST00000199341 750 ntBASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm5051-201ENSMUST00000204085 485 ntBASIC14.66□□□□□ -0.06
Nup98Q6PFD9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm1821-202ENSMUST00000227415 750 ntBASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm23596-201ENSMUST00000104304 132 ntBASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm23085-201ENSMUST00000157849 293 ntBASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm37246-201ENSMUST00000192665 835 ntBASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nup98Q6PFD9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms