Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd3Q6P9Z1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Gm7488-201ENSMUST00000117148 684 ntBASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.63□□□□□ -0.55
Smarcd3Q6P9Z1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smarcd3Q6P9Z1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms