Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm8598-201ENSMUST00000221184 836 ntBASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf1Q69ZI1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Gm43818-201ENSMUST00000200605 466 ntBASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh3rf1Q69ZI1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Daam2-202ENSMUST00000224595 1926 ntBASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh3rf1Q69ZI1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms