Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm45743-201ENSMUST00000212701 2795 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm14921-201ENSMUST00000118643 908 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm11918-201ENSMUST00000121660 179 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.65□□□□□ -0.86
Zfp248Q640N4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm23984-201ENSMUST00000157139 203 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm37922-201ENSMUST00000195596 455 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm8598-201ENSMUST00000221184 836 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.65□□□□□ -0.86
Zfp248Q640N4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Zfp248Q640N4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Zfp248Q640N4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Zfp248Q640N4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Zfp248Q640N4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Zfp248Q640N4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.65□□□□□ -0.87
Zfp248Q640N4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Zfp248Q640N4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Zfp248Q640N4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Zfp248Q640N4 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.65□□□□□ -0.87
Zfp248Q640N4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Zfp248Q640N4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Gm13123-201ENSMUST00000122173 492 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 Gm10156-201ENSMUST00000122364 462 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Proscos-202ENSMUST00000178990 666 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.64□□□□□ -0.87
Zfp248Q640N4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Zfp248Q640N4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms