Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.24□□□□□ -0.13
Sycp1Q62209 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.24□□□□□ -0.13
Sycp1Q62209 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.24□□□□□ -0.13
Sycp1Q62209 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.24□□□□□ -0.13
Sycp1Q62209 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sycp1Q62209 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.24□□□□□ -0.13
Sycp1Q62209 Gm2231-201ENSMUST00000125661 612 ntBASIC14.24□□□□□ -0.13
Sycp1Q62209 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.24□□□□□ -0.13
Sycp1Q62209 Gm27731-201ENSMUST00000185192 107 ntBASIC14.24□□□□□ -0.13
Sycp1Q62209 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.24□□□□□ -0.13
Sycp1Q62209 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.24□□□□□ -0.13
Sycp1Q62209 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sycp1Q62209 Gm25857-201ENSMUST00000082788 129 ntBASIC14.24□□□□□ -0.13
Sycp1Q62209 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Sycp1Q62209 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sycp1Q62209 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sycp1Q62209 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Mir686-201ENSMUST00000102174 109 ntBASIC14.23□□□□□ -0.13
Sycp1Q62209 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Gm1335-201ENSMUST00000121653 386 ntBASIC14.23□□□□□ -0.13
Sycp1Q62209 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.23□□□□□ -0.13
Sycp1Q62209 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.23□□□□□ -0.13
Sycp1Q62209 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sycp1Q62209 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.23□□□□□ -0.13
Sycp1Q62209 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sycp1Q62209 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.22□□□□□ -0.13
Sycp1Q62209 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.22□□□□□ -0.13
Sycp1Q62209 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.22□□□□□ -0.13
Sycp1Q62209 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.22□□□□□ -0.13
Sycp1Q62209 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sycp1Q62209 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.22□□□□□ -0.13
Sycp1Q62209 Mir1982-201ENSMUST00000157368 74 ntBASIC14.22□□□□□ -0.13
Sycp1Q62209 Gm17208-201ENSMUST00000168388 535 ntBASIC14.22□□□□□ -0.13
Sycp1Q62209 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms