Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.57□□□□□ -0.56
VcanQ62059 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
VcanQ62059 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Gm12419-201ENSMUST00000116649 636 ntBASIC11.57□□□□□ -0.56
VcanQ62059 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Gm24943-201ENSMUST00000158329 433 ntBASIC11.57□□□□□ -0.56
VcanQ62059 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.57□□□□□ -0.56
VcanQ62059 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.57□□□□□ -0.56
VcanQ62059 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.57□□□□□ -0.56
VcanQ62059 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
VcanQ62059 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.57□□□□□ -0.56
VcanQ62059 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
VcanQ62059 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.57□□□□□ -0.56
VcanQ62059 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.57□□□□□ -0.56
VcanQ62059 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
VcanQ62059 Gm22920-201ENSMUST00000102175 109 ntBASIC11.57□□□□□ -0.56
VcanQ62059 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.57□□□□□ -0.56
VcanQ62059 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.57□□□□□ -0.56
VcanQ62059 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.57□□□□□ -0.56
VcanQ62059 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.57□□□□□ -0.56
VcanQ62059 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
VcanQ62059 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.56□□□□□ -0.56
VcanQ62059 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
VcanQ62059 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Gm25766-201ENSMUST00000104101 131 ntBASIC11.56□□□□□ -0.56
VcanQ62059 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.56□□□□□ -0.56
VcanQ62059 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.56□□□□□ -0.56
VcanQ62059 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.56□□□□□ -0.56
VcanQ62059 Gm44647-201ENSMUST00000207402 428 ntBASIC11.56□□□□□ -0.56
VcanQ62059 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.56□□□□□ -0.56
VcanQ62059 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.56□□□□□ -0.56
VcanQ62059 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.56□□□□□ -0.56
VcanQ62059 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
VcanQ62059 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Gm11500-201ENSMUST00000118237 601 ntBASIC11.56□□□□□ -0.56
VcanQ62059 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.56□□□□□ -0.56
VcanQ62059 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC11.56□□□□□ -0.56
VcanQ62059 Gm27675-201ENSMUST00000184527 94 ntBASIC11.56□□□□□ -0.56
VcanQ62059 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
VcanQ62059 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VcanQ62059 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
VcanQ62059 Gm24954-201ENSMUST00000178831 110 ntBASIC11.56□□□□□ -0.56
VcanQ62059 Gm26875-201ENSMUST00000181006 950 ntBASIC11.56□□□□□ -0.56
VcanQ62059 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.56□□□□□ -0.56
VcanQ62059 Gm43186-201ENSMUST00000198130 824 ntBASIC11.56□□□□□ -0.56
VcanQ62059 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
VcanQ62059 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.56□□□□□ -0.56
VcanQ62059 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.55□□□□□ -0.56
VcanQ62059 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
VcanQ62059 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
VcanQ62059 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
VcanQ62059 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.55□□□□□ -0.56
VcanQ62059 Gm13315-201ENSMUST00000120376 991 ntBASIC11.55□□□□□ -0.56
VcanQ62059 Gm22846-201ENSMUST00000157706 270 ntBASIC11.55□□□□□ -0.56
VcanQ62059 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
VcanQ62059 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VcanQ62059 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms