Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.98□□□□□ -0.01
Ctr9Q62018 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ctr9Q62018 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm11531-201ENSMUST00000117614 555 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm2546-201ENSMUST00000182630 991 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.97□□□□□ -0.01
Ctr9Q62018 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm44405-201ENSMUST00000198952 126 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm5950-201ENSMUST00000213337 772 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm9257-201ENSMUST00000221254 232 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.97□□□□□ -0.01
Ctr9Q62018 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.97□□□□□ -0.01
Ctr9Q62018 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ctr9Q62018 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ctr9Q62018 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Ctr9Q62018 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.96□□□□□ -0.01
Ctr9Q62018 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Ctr9Q62018 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.96□□□□□ -0.01
Ctr9Q62018 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Gm13736-201ENSMUST00000119272 253 ntBASIC14.96□□□□□ -0.01
Ctr9Q62018 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.96□□□□□ -0.01
Ctr9Q62018 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.96□□□□□ -0.01
Ctr9Q62018 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.96□□□□□ -0.01
Ctr9Q62018 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.96□□□□□ -0.01
Ctr9Q62018 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Ctr9Q62018 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.96□□□□□ -0.01
Ctr9Q62018 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ctr9Q62018 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ctr9Q62018 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ctr9Q62018 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ctr9Q62018 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ctr9Q62018 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ctr9Q62018 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ctr9Q62018 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.95□□□□□ -0.02
Ctr9Q62018 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ctr9Q62018 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms