Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Sox17Q61473 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.88□□□□□ -0.51
Sox17Q61473 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox17Q61473 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox17Q61473 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox17Q61473 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Sox17Q61473 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.87□□□□□ -0.51
Sox17Q61473 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Sox17Q61473 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.87□□□□□ -0.51
Sox17Q61473 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Gm9797-201ENSMUST00000052902 613 ntBASIC11.87□□□□□ -0.51
Sox17Q61473 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox17Q61473 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox17Q61473 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Sox17Q61473 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.87□□□□□ -0.51
Sox17Q61473 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox17Q61473 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Sox17Q61473 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sox17Q61473 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sox17Q61473 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Sox17Q61473 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sox17Q61473 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Gm14350-201ENSMUST00000116642 640 ntBASIC11.86□□□□□ -0.51
Sox17Q61473 Gm14701-201ENSMUST00000117156 348 ntBASIC11.86□□□□□ -0.51
Sox17Q61473 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Sox17Q61473 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox17Q61473 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.86□□□□□ -0.51
Sox17Q61473 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.86□□□□□ -0.51
Sox17Q61473 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox17Q61473 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sox17Q61473 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.86□□□□□ -0.51
Sox17Q61473 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox17Q61473 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox17Q61473 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox17Q61473 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms