Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a4Q60857 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a4Q60857 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.98□□□□□ -0.33
Slc6a4Q60857 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a4Q60857 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a4Q60857 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a4Q60857 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a4Q60857 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.97□□□□□ -0.33
Slc6a4Q60857 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Gm14999-201ENSMUST00000121039 624 ntBASIC12.97□□□□□ -0.33
Slc6a4Q60857 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.97□□□□□ -0.33
Slc6a4Q60857 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.97□□□□□ -0.33
Slc6a4Q60857 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a4Q60857 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.96□□□□□ -0.33
Slc6a4Q60857 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.96□□□□□ -0.33
Slc6a4Q60857 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Slc6a4Q60857 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.96□□□□□ -0.33
Slc6a4Q60857 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.96□□□□□ -0.33
Slc6a4Q60857 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a4Q60857 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a4Q60857 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a4Q60857 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Slc6a4Q60857 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Slc6a4Q60857 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a4Q60857 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a4Q60857 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a4Q60857 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a4Q60857 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a4Q60857 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a4Q60857 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a4Q60857 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.95□□□□□ -0.34
Slc6a4Q60857 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.95□□□□□ -0.34
Slc6a4Q60857 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Gm15547-201ENSMUST00000122152 333 ntBASIC12.95□□□□□ -0.34
Slc6a4Q60857 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Gm24845-201ENSMUST00000158034 109 ntBASIC12.95□□□□□ -0.34
Slc6a4Q60857 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.95□□□□□ -0.34
Slc6a4Q60857 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Gm27023-201ENSMUST00000182372 285 ntBASIC12.95□□□□□ -0.34
Slc6a4Q60857 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.95□□□□□ -0.34
Slc6a4Q60857 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.95□□□□□ -0.34
Slc6a4Q60857 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms