Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Gm18018-201ENSMUST00000198273 408 ntBASIC13.37□□□□□ -0.27
Foxd4Q60688 Gm45668-201ENSMUST00000211271 493 ntBASIC13.37□□□□□ -0.27
Foxd4Q60688 Gm21089-201ENSMUST00000215843 325 ntBASIC13.37□□□□□ -0.27
Foxd4Q60688 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Foxd4Q60688 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxd4Q60688 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Foxd4Q60688 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.36□□□□□ -0.27
Foxd4Q60688 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Foxd4Q60688 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.36□□□□□ -0.27
Foxd4Q60688 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.36□□□□□ -0.27
Foxd4Q60688 Gm12485-201ENSMUST00000119641 291 ntBASIC13.36□□□□□ -0.27
Foxd4Q60688 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Foxd4Q60688 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.36□□□□□ -0.27
Foxd4Q60688 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.36□□□□□ -0.27
Foxd4Q60688 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.36□□□□□ -0.27
Foxd4Q60688 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.36□□□□□ -0.27
Foxd4Q60688 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Gm8920-201ENSMUST00000196153 924 ntBASIC13.36□□□□□ -0.27
Foxd4Q60688 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Gm44353-201ENSMUST00000200618 138 ntBASIC13.36□□□□□ -0.27
Foxd4Q60688 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.36□□□□□ -0.27
Foxd4Q60688 AC115784.1-201ENSMUST00000227687 1010 ntBASIC13.36□□□□□ -0.27
Foxd4Q60688 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Foxd4Q60688 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Foxd4Q60688 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Foxd4Q60688 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.36□□□□□ -0.27
Foxd4Q60688 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxd4Q60688 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Foxd4Q60688 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Gm11478-201ENSMUST00000117851 599 ntBASIC13.35□□□□□ -0.27
Foxd4Q60688 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC13.35□□□□□ -0.27
Foxd4Q60688 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Gm21854-201ENSMUST00000179901 471 ntBASIC13.35□□□□□ -0.27
Foxd4Q60688 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxd4Q60688 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms