Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.03□□□□□ -0.16
Ccdc85aQ5SP85 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc85aQ5SP85 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc85aQ5SP85 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc85aQ5SP85 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc85aQ5SP85 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Gm23949-201ENSMUST00000104027 127 ntBASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Gm13888-201ENSMUST00000119148 422 ntBASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Gm39404-201ENSMUST00000216350 313 ntBASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Acot6-202ENSMUST00000222921 3622 ntBASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc85aQ5SP85 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Gm25116-201ENSMUST00000157191 122 ntBASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc85aQ5SP85 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Mir874-201ENSMUST00000104769 76 ntBASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Gm12165-201ENSMUST00000117047 342 ntBASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Gm14921-201ENSMUST00000118643 908 ntBASIC14□□□□□ -0.17
Ccdc85aQ5SP85 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms