Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm44831-201ENSMUST00000208469 2989 ntBASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm24513-201ENSMUST00000174964 138 ntBASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm27397-201ENSMUST00000184997 107 ntBASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm7775-201ENSMUST00000218871 853 ntBASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 AC124732.2-201ENSMUST00000221977 316 ntBASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms