Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
Trim41Q5NCC3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Gm5863-201ENSMUST00000121760 1008 ntBASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Gm24845-201ENSMUST00000158034 109 ntBASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Gm23218-201ENSMUST00000158124 276 ntBASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Gm7003-201ENSMUST00000195089 312 ntBASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Gm34023-201ENSMUST00000195539 217 ntBASIC22.01■■□□□ 1.11
Trim41Q5NCC3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Arhgef33-210ENSMUST00000225548 456 ntBASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim41Q5NCC3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC22■■□□□ 1.11
Trim41Q5NCC3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Gm7541-201ENSMUST00000118361 535 ntBASIC22■■□□□ 1.11
Trim41Q5NCC3 Gm14832-201ENSMUST00000121289 322 ntBASIC22■■□□□ 1.11
Trim41Q5NCC3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC22■■□□□ 1.11
Trim41Q5NCC3 Gm10051-201ENSMUST00000145209 414 ntBASIC22■■□□□ 1.11
Trim41Q5NCC3 Gm8856-201ENSMUST00000185254 1144 ntBASIC22■■□□□ 1.11
Trim41Q5NCC3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC22■■□□□ 1.11
Trim41Q5NCC3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Gm10312-201ENSMUST00000078515 489 ntBASIC22■■□□□ 1.11
Trim41Q5NCC3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Trim41Q5NCC3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC22■■□□□ 1.11
Trim41Q5NCC3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Gm13315-201ENSMUST00000120376 991 ntBASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Gm25604-201ENSMUST00000158359 133 ntBASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Gm17040-202ENSMUST00000170597 889 ntBASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Gm17391-201ENSMUST00000171036 126 ntBASIC21.99■■□□□ 1.11
Trim41Q5NCC3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim41Q5NCC3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Gm43908-201ENSMUST00000205074 1472 ntBASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Gm13996-201ENSMUST00000118456 430 ntBASIC21.98■■□□□ 1.11
Trim41Q5NCC3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim41Q5NCC3 Gm19353-201ENSMUST00000184561 445 ntBASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms