Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.22□□□□□ -0.45
Vps13aQ5H8C4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Gm25766-201ENSMUST00000104101 131 ntBASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.21□□□□□ -0.45
Vps13aQ5H8C4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13aQ5H8C4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm13263-201ENSMUST00000121271 838 ntBASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm9135-201ENSMUST00000182963 990 ntBASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm5700-201ENSMUST00000191483 989 ntBASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms