Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Gm25857-201ENSMUST00000082788 129 ntBASIC13.49□□□□□ -0.25
Syne3Q4FZC9 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Syne3Q4FZC9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Gm16177-201ENSMUST00000120728 718 ntBASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Mir1982-201ENSMUST00000157368 74 ntBASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Gm45784-201ENSMUST00000188360 142 ntBASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syne3Q4FZC9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Gm16479-201ENSMUST00000121706 932 ntBASIC13.47□□□□□ -0.25
Syne3Q4FZC9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Gm10268-201ENSMUST00000085340 555 ntBASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Syne3Q4FZC9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Syne3Q4FZC9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Syne3Q4FZC9 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.46□□□□□ -0.25
Syne3Q4FZC9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms