Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Arhgef3-204ENSMUST00000225949 3198 ntBASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.19■□□□□ 0.18
Ccdc27Q3V036 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc27Q3V036 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc27Q3V036 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Gm43365-201ENSMUST00000196522 2106 ntBASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc27Q3V036 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.16■□□□□ 0.18
Ccdc27Q3V036 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Gm15991-202ENSMUST00000212123 3565 ntBASIC16.16■□□□□ 0.18
Ccdc27Q3V036 Gm43727-201ENSMUST00000198021 2647 ntBASIC16.15■□□□□ 0.18
Ccdc27Q3V036 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.15■□□□□ 0.18
Ccdc27Q3V036 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc27Q3V036 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms